When I started a new Claude Code Desktop session, it went to the default directory which is ..\Claude directory. I gave it a strict instruction to only work on ..\Projects\Stage1 directory as my Day 2 agent-context-seed.md is there. I pasted your Day 3 prompt in the new session. At the end of the "Day 3 prompt", it asked me 2 questions:
(1) Create zero-one directory if it doesn't exist. I declined and instructed Claude to work in my ..\Projects\Stage1 directory. I guess it is trying to save the agent-priority-matrix.md.
The Day-3 agent-priority-matrix is now in ..\Projects\Stage1 directory. I hope I am doing the right thing.
(2) To allow Claude to run Check git status and diff in Stage1 with a command "cd "C:\Users\FelixChua\Projects\Stage1" && git status && git diff". Do I need git hub? Is it copying my local files into git hub (which is a public space)? I have not allowed it yet. Please advise.